PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY13360.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 866aa    MW: 95611.5 Da    PI: 6.1044
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY13360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.7e-24127228199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d+++++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  TEY13360.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 221
                 99*****************************8544444..48************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  TEY13360.1 222 LLGIRRA 228
                 ****997 PP
2Auxin_resp1201.8e-39253336183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dpvrWpnS+Wrs+k
  TEY13360.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVHhTRVSVGMRFRMLFETEESSVRRYMGTITGISDSDPVRWPNSHWRSVK 336
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 866 aa     Download sequence    
MKLSACLNQQ SPEGEKSCLN SELWHACAGP LVSLPSLGSH VVYFPQGHSE QVAVSTNKEV  60
DAQMPNYQSL PAQLVCQLHN VTMHADIETD EVYAQMTLQP LNAQEQKEVS FLPADMGVAS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHNNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYIKAVHHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DSDPVRWPNS HWRSVKVSYT FSASCNLCWL GRINSWREAA  360
ESFTLEIEPL TTFPMYPSPF PLRLKRPWPS GLPSYAGMKI DDMGLNPSLM WLRGDGNASP  420
EPRDGGLTLD AAEDMRVMDP SKQILSSIMQ FQQPQSIGSR SAGYMQQPLS SAPFVQSLQI  480
QSQAMSQSQA NLLQQNSFNE AQIHQQQHQH SNQTQQVVDP QLSQLSSNSQ VQSQTMHSMS  540
SMQQCFPESN VKPVGNMSSP LHSLLSSVTQ EEASNLLNVS RSNNLLSSSG WPTKRVALDP  600
LSSGIPSQTI SPQADQLGLL NSNATSNPVS LPPFPSRDCL MEQEANNDPH NHFLFGVNID  660
SSSLLMPNGL SNLKAVSEPD NAAMTFASSS YMTSSGADYS LNPTVTSSSF IDDSGFLISN  720
DNGGHNDPSD RTFVKVHKTG SFGRSLDITK FSSYSELRSE LAQMFGLEGE LEDPLRSGWQ  780
LVFVDRENDV LLLGDDPWQE FVNSVWCIKI LSPQEVQEMG KLGLELLNSI PLQRLPVQNG  840
GCDSYGSRQE GRNMSTVIPS VGSLDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein