PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13580.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 230aa MW: 25946.2 Da PI: 8.485

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.9	8.4e-19	90	144	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k TEY13580.1 90 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTK 144 678899***********************************************98 PP
2	HD-ZIP_I/II	123.4	1.1e-39	90	177	1	88
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+k q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ TEY13580.1 90 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHKELQELK 177 69************************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MDFDDLCNTG LVLGLGNSSS SSSPKNHTKK DDHVRKAAEP SLTLNLSDVK KDDSDLYRQD 60 SAASSFSTVS VKREREVRSE DEDEDGPNGR KKLRLTKAQS ALLEESFKQH STLNPKQKQD 120 LARELKLRPR QVEVWFQNRR ARTKLKQTEV DCEFLKKCCE TLTDENRRLH KELQELKLAQ 180 PLYMQLPAAT LTMCPSCERI GGAAADNAAK TSFVTKPHFY NPFTNPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	147	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	8e-81	HD-ZIP family protein