PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13741.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YB

Protein Properties

Length: 553aa MW: 59958.9 Da PI: 5.2361

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	183.8	1.4e-57	19	114	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+kyre+egek TEY13741.1 19 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLAKYREMEGEK 114 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MADSDNDSGG HSNSNASSRE QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI 60 SFVTGEASDK CQREKRKTIN GDDLLWAMTT LGFEEYVEPL KVYLAKYREM EGEKSSVAGV 120 KEGGGGGGGG AVSSGGGIYG VFCSYLSDDL SGFVTYLMIM DGKQTSQICC LKYCIHEMAL 180 EIGLVNHHSP AAGRHPHHAP KNATAVRLRQ AYDALQSWKR VIYSDPRQLT SNWRGPDVCA 240 YRGVYCAPHP NDTSITATVA GIDLNHGDLA GFLPESLGLL SDLALLHLNS NRFCGILPSS 300 LANLSLLFEL DLSNNRFVGP FPAVVLALPS LHFLDLRYNE FEGPVPPELF NNNKLDAIFI 360 NNNWLTSVIP ASLGSSSASV VVFANNRFSG CLPPTIAKFA DTLEELLLIN SSISGCLPVE 420 LGFLYKLRVL DISQNDIVGP IPYSLAGLAH LEQLNLGHNR LSGTVPEGIC ALPNLANFTF 480 SYNFLCEEEG ICGNLTARGV AYDDRRNCLP EKPRQRSEKE CEAEKPVECF EGECGGREIH 540 DGVSVSATSP PPS

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MADSDNDSGG HSNSNASSRE QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI  60
SFVTGEASDK CQREKRKTIN GDDLLWAMTT LGFEEYVEPL KVYLAKYREM EGEKSSVAGV  120
KEGGGGGGGG AVSSGGGIYG VFCSYLSDDL SGFVTYLMIM DGKQTSQICC LKYCIHEMAL  180
EIGLVNHHSP AAGRHPHHAP KNATAVRLRQ AYDALQSWKR VIYSDPRQLT SNWRGPDVCA  240
YRGVYCAPHP NDTSITATVA GIDLNHGDLA GFLPESLGLL SDLALLHLNS NRFCGILPSS  300
LANLSLLFEL DLSNNRFVGP FPAVVLALPS LHFLDLRYNE FEGPVPPELF NNNKLDAIFI  360
NNNWLTSVIP ASLGSSSASV VVFANNRFSG CLPPTIAKFA DTLEELLLIN SSISGCLPVE  420
LGFLYKLRVL DISQNDIVGP IPYSLAGLAH LEQLNLGHNR LSGTVPEGIC ALPNLANFTF  480
SYNFLCEEEG ICGNLTARGV AYDDRRNCLP EKPRQRSEKE CEAEKPVECF EGECGGREIH  540
DGVSVSATSP PPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-62	NF-YB family protein