PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13838.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 301aa MW: 32908.1 Da PI: 6.9648

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.8	3.5e-06	20	59	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Htv 39 + C +++ + lfC+ ++++C C ++ H+ H++ TEY13838.1 20 KPCGYCKSAAALLFCRVESTFMCIPCDSKVHNAtnmkHER 59 68*****9*******************768888875 PP
2	zf-B_box	27.7	5.8e-09	60	105	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ C+ + lC +C +H+ H++vp+ TEY13838.1 60 VWMCEVCEQAPAVVTCKADAAALCVTCDRDIHSAnplasrHDRVPV 105 689*****************************66899999999986 PP
3	CCT	71.4	2.3e-24	229	272	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRYkeKrk+RkFeK+irY+sRKa+AesRpR+KGrF+k++ TEY13838.1 229 REARVLRYKEKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT 272 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MTHDSGGGLP RPKLFPAAAK PCGYCKSAAA LLFCRVESTF MCIPCDSKVH NATNMKHERV 60 WMCEVCEQAP AVVTCKADAA ALCVTCDRDI HSANPLASRH DRVPVVPFYD TVESAAAADS 120 DASLFADGGY SWIPTSPIAA PKDAPPDLKA MELFFQDSDQ FIDFDSYQIS SQPYSDSVVP 180 VQTPVSSSSM DVGVVPDGSS LSEISYPFGR NISVSNPDLT GNQSSQMDRE ARVLRYKEKR 240 KNRKFEKTIR YASRKAYAES RPRIKGRFAK RTDSESDIDR IFGAGAANFI ADARFGIVPS 300 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24790.2	1e-44	DBB family protein