PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY14616.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 248aa    MW: 25824.4 Da    PI: 9.0271
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY14616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.25e-075479227
                -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                kt+lC+ f     Ck+ d+C+FaHg+
  TEY14616.1 54 KTKLCNKFNSAEGCKFNDKCHFAHGE 79
                89**********************96 PP
2zf-CCCH35.81.4e-11215239126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +kt+lC +f++ G C +G+rC+FaHg
  TEY14616.1 215 FKTKLCENFSK-GSCTFGERCHFAHG 239
                 69*********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVGCPFGENC HFLHFVPGGF KAVAHMMNLS PAPALKTPTG PPPNQNGSAS VAVKTKLCNK  60
FNSAEGCKFN DKCHFAHGER ELGRPIAHSQ ADPRAVGPVT PYFGARAEPP VQGLAASFGA  120
SATAKISVDA SLAGAIIGKA GVNSKQICRQ TGAKLSIRDH ETDPSLRNIE LEGTFEQIKQ  180
ASTMVRELIV SIGSGNAPAK TLGGGGGPPT PGSNFKTKLC ENFSKGSCTF GERCHFAHGA  240
AELHKTGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.12e-63C3H family protein