PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY15104.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 222aa MW: 25067.6 Da PI: 9.6292

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY15104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.2	5.8e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl+e++s TEY15104.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLHEFAS 59 8***********************************************86 PP
2	K-box	90.3	3.6e-30	77	171	5	98
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++ +e+++++l++e+a + k+ie+L++++R+llGe+L++++++eLqqLeqqLe+s+++iR++K++++++qie+l++kek+l en +L +k+ TEY15104.1 77 QANNpPSEHNMQQLKHEAASMIKKIEQLESSKRKLLGEGLGPCTIEELQQLEQQLERSVTTIRARKMQVYKQQIEHLKEKEKALAAENAMLCEKF 171 33335899***********************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLHEFASS 60 SMHETIERYQ KYTKDSQANN PPSEHNMQQL KHEAASMIKK IEQLESSKRK LLGEGLGPCT 120 IEELQQLEQQ LERSVTTIRA RKMQVYKQQI EHLKEKEKAL AAENAMLCEK FGLQARGGGG 180 GGGGSNEERA VVPSAEISEV SDVETELFIG LPETRHKRPY QK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	4e-80	MIKC_MADS family protein