PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY15127.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 231aa    MW: 24747.3 Da    PI: 7.1224
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY15127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.72.6e-40231231100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll+++p ++r da+ +++yeA+ r+rdP+yG+v++i++lqqq+ +l++el++l+
  TEY15127.1  23 PCGACKFLRRKCVAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLHHIPSQKRLDAVVTICYEAQSRLRDPIYGCVAHIFALQQQVVNLQQELSYLQ 121
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  TEY15127.1 122 AH 123
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MIAAESDIMS SENAAGSSGG GGPCGACKFL RRKCVAGCIF APYFDSEQGA AHFAAVHKVF  60
GASNVSKLLH HIPSQKRLDA VVTICYEAQS RLRDPIYGCV AHIFALQQQV VNLQQELSYL  120
QAHLAALELP TPPPLQPQQL MVPASQSILD LPPIPAAYDF SAMCGDMVAP PSLWSVYPRQ  180
QIDQQRQFSN AAVGGGGGDL QELARELLNR HAPPMVVRCG NQASSLPPNS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.12e-57LBD family protein