PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY15129.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 182aa    MW: 19737.7 Da    PI: 7.4174
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY15129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.55.3e-39111111100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+k+Cv+apyf ++q +++fa+vh++FGasn +kll ++p++ r da+ +l+yeA ar+rdPvyG+v++i++lqqq+ +l+aela+++
  TEY15129.1  11 PCGACKFLRRKCVKGCVFAPYFDSDQgAAHFAAVHRVFGASNASKLLLRIPPHCRLDAVVTLCYEALARVRDPVYGCVAHIFTLQQQVVNLQAELAHTQ 109
                 7***********************9989********************************************************************998 PP

      DUF260  99 ee 100
                 ++
  TEY15129.1 110 AR 111
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MSCVVEGGGG PCGACKFLRR KCVKGCVFAP YFDSDQGAAH FAAVHRVFGA SNASKLLLRI  60
PPHCRLDAVV TLCYEALARV RDPVYGCVAH IFTLQQQVVN LQAELAHTQA RISTLQHTPP  120
SLPLPVLNSS MVETSPSSLG MVSFCSSSVD QEVEDDGDLQ SLAREYVSRY FPGVRFMPPT  180
PH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.19e-66LBD family protein