PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY15278.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 253aa MW: 28170.8 Da PI: 5.278

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY15278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	175.8	4.3e-55	76	179	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q i++atdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdflvdiv TEY15278.1 76 QLQNFWATQyeeIDQATDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 174 89***99888999******************************************************************************** PP NF-YC 97 prdel 101 pr++l TEY15278.1 175 PREDL 179 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MDQQGNGQAQ GMGSSAQMPY PVNPYQANQM TGASSPAASS QSPRAAGLSA SPAQMAQHQL 60 AYQHIQQQQQ QQLQQQLQNF WATQYEEIDQ ATDFKNHSLP LARIKKIMKA DEDVRMISAE 120 APVIFARACE MFILELTLRA WNHTEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREDLK 180 DEVLASMPRG PLPVGAPSEG LPYYYMPQQP TPPVGAPAMY VGKPVDPGMY GQQSRPYMAQ 240 QMWPQQPPPP SDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	155	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-73	NF-YC family protein