PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY15742.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 244aa    MW: 27274.5 Da    PI: 10.0616
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY15742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.36.2e-26959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+ rqvtfskRr g+ KKA+E+S LCda+va+i+fs++gkl+ y+s
  TEY15742.1  9 KRIENKISRQVTFSKRRSGLWKKANEISLLCDADVALIVFSTSGKLFHYCS 59
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRGRVEMKR IENKISRQVT FSKRRSGLWK KANEISLLCD ADVALIVFST SGKLFHYCSH  60
PSLDVHLRRQ APPYHNLRSS SSLTKPIQLP ATAPCSYLLL QHGFSFTYGQ LPVLAAYTPP  120
PHCPSPSSAK IVLEWTATSK GRQFDRIFGV WIDGAEGLRS CTAEPFAAGI IWTVKKEVTR  180
YSSLLSTNQT LAVYLGNLVD STYIGVYHVN ILREFGRLAP RPSKTWPSSA ISAQNYEVQI  240
LYIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-28MIKC_MADS family protein