PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY15954.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 212aa MW: 24041.4 Da PI: 10.085

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY15954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.8	5.8e-19	5	49	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W++eEd+ll ++v+ +G ++W++I++ ++ gR++k+c++rw + TEY15954.1 5 KGPWSPEEDDLLQRLVENHGARNWSLISKSIP-GRSGKSCRLRWCN 49 79****************************.*********88 PP
2	Myb_DNA-binding	54.7	2.3e-17	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tIar + gRt++ +k++w++ TEY15954.1 59 AFTAEEDDTIIQAHAKFGNK-WATIARFLS-GRTDNAIKNHWNST 101 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MDRIKGPWSP EEDDLLQRLV ENHGARNWSL ISKSIPGRSG KSCRLRWCNQ ISPQVEHRAF 60 TAEEDDTIIQ AHAKFGNKWA TIARFLSGRT DNAIKNHWNS TLKRKCFSMA EELAEFDPEA 120 HHRHKRSASY GLICSGSAST RAVRPGRTIR QGQSAAEKQF FSAEFLGVMQ EIVRKEVRNY 180 MAGMEMGQKG MCLQRDAMVN GVIKRMGMSN VD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	8e-70	MYB family protein