PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16168.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 211aa MW: 23938.1 Da PI: 5.5096

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	114.1	9.4e-36	4	103	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk l r+C++dC++ pyfpa++pkkf nvh++FGasnv+k+lk+l++++re+a++sl+yeAe +rdPv+G ++ i +l+q+++q++a+++ +k+ TEY16168.1 4 RCAACKCLCRECTEDCPMEPYFPADDPKKFSNVHEVFGASNVSKVLKELEPSQREAAANSLAYEAEHLLRDPVHGYLRQIYSLKQKINQVHADMENTKK 102 6*********************************************************************************************99998 PP DUF260 100 e 100 e TEY16168.1 103 E 103 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MRSRCAACKC LCRECTEDCP MEPYFPADDP KKFSNVHEVF GASNVSKVLK ELEPSQREAA 60 ANSLAYEAEH LLRDPVHGYL RQIYSLKQKI NQVHADMENT KKELAAYIGP SAYQPMLLSQ 120 PQQHLVIPAQ EQEITAIGRG CGSNDASDQH EHEHDRLDPL FLQQLQQLQD YFEAQQLAQM 180 HDFIPDKIRL FEIPCNGSLP PPAPVLQYLG H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-41	LBD family protein