PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16566.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 349aa MW: 40109.2 Da PI: 9.5841

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.8	4.6e-31	71	120	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ TEY16566.1 71 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 120 79***********************************************8 PP
2	K-box	107.9	1.2e-35	138	236	3	100
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk.ekelqeenkaLrkklee 100 +ss+ s +ea+++++qqe++kL+++i+nLq+++R+++Ge+L+ L+l+eL++Le+++e+++ kiRskKnell+++ie++qk+ e +l+++n++Lr+k++e TEY16566.1 138 SSSSGSISEANTQYYQQESSKLRAQISNLQNNNRNMVGECLGALNLRELKNLETKVERAIGKIRSKKNELLFAEIEYMQKRqEIDLHQNNQYLRAKIAE 236 5566669*********************************************************************9984679*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MQFFDIFIFI LDLGLKQNVK KGLKNIKKEV SCIYIHMPIF LILQLEMELQ SDQSREMSAE 60 RKIGRGKIEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL CDAEVALIVF STRGRLYEYA 120 NNSVKATIER YKKASSDSSS SGSISEANTQ YYQQESSKLR AQISNLQNNN RNMVGECLGA 180 LNLRELKNLE TKVERAIGKI RSKKNELLFA EIEYMQKRQE IDLHQNNQYL RAKIAETERG 240 QQHMNLMPGS SDQYHGLVQS QPFDYLQPSD DYHRQDQTSL QLVLVKLIMV KCEPWRSAFR 300 ESMSGFNLSS KGCTISLMVS LQIDPLLTVL YRFFGIQPSG ANHAILLAP

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MQFFDIFIFI LDLGLKQNVK KGLKNIKKEV SCIYIHMPIF LILQLEMELQ SDQSREMSAE  60
RKIGRGKIEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL CDAEVALIVF STRGRLYEYA  120
NNSVKATIER YKKASSDSSS SGSISEANTQ YYQQESSKLR AQISNLQNNN RNMVGECLGA  180
LNLRELKNLE TKVERAIGKI RSKKNELLFA EIEYMQKRQE IDLHQNNQYL RAKIAETERG  240
QQHMNLMPGS SDQYHGLVQS QPFDYLQPSD DYHRQDQTSL QLVLVKLIMV KCEPWRSAFR  300
ESMSGFNLSS KGCTISLMVS LQIDPLLTVL YRFFGIQPSG ANHAILLAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	1e-91	MIKC_MADS family protein