PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16954.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 193aa MW: 21771.6 Da PI: 8.1048

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00034	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k Fs+ L H +H TEY16954.1 61 FRCMICNKAFSSYQALGGHRASH 83 89***********9999998887 PP
2	zf-C2H2	12.1	0.00058	110	132	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k F++ L H r+H TEY16954.1 110 HECPICFKIFPSGQALGGHKRSH 132 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MFPCGPVPRY SDESSLDLSS SEQEEVAFTL ILLSMDCTNS DSNNNNRIKS NRNDQSEDNK 60 FRCMICNKAF SSYQALGGHR ASHKKFKGCC APTTTNPPHN LQDCKKSKDH ECPICFKIFP 120 SGQALGGHKR SHLITDQPKI NPTGHLRVEE TQAPQVRRFL DLNLPAPVEE ECNVELKPWW 180 IGAARPNLRL KYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	2e-32	C2H2 family protein