PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY17354.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 253aa    MW: 27607.8 Da    PI: 7.4369
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY17354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.71.3e-223279249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +ien++n qvtfskRr+g++KKA+ELS+LC+ae a+++fs+ +k + +
  TEY17354.1 32 KIENDTNLQVTFSKRRAGVFKKASELSILCGAECALVVFSPGNKPHSF 79
                79***************************************9987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MHPEDGDDHM MVHPENEQRR KGKGRQKIEM AKIENDTNLQ VTFSKRRAGV FKKASELSIL  60
CGAECALVVF SPGNKPHSFG HPSVEAVTNR FLQANGGGGG APPPVNAAER MIMVHSEAAT  120
AQRNQELVAL ETRVEQAKQR RRELDGMVPP LQMENLNYEH LEQLRNSVLM YKHGVGAKFS  180
GATSSSVGPG AYRYGQPELG YTVQYPAMGD NNGMAGYNYG DPSAVVPYDP ATGTSNANYG  240
GFPGNYHHHH PGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-31M-type_MADS family protein