PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY17417.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 213aa    MW: 23648.4 Da    PI: 8.7377
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY17417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.62.4e-2199146249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                 +ien++n qvtfskRr+g++KKA+EL +LC+ae a+++fs+ +k + +
  TEY17417.1  99 KIENDTNLQVTFSKRRAGVFKKASELGTLCGAECALVVFSPGNKPHSF 146
                 79***************************************9987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MLQRQQELAN VEAQLEQEKQ RKRELEALQV PLMQMDDVTY EQLGQLRNSL MVFKPSSMVA  60
RNGNNDYPMH PEGGDDHMMH PENEQRRKGK GRQKIEMAKI ENDTNLQVTF SKRRAGVFKK  120
ASELGTLCGA ECALVVFSPG NKPHSFGHPS VEAVTNSEGL KRTAATQANN RRSNVSAAPP  180
VTDSSVVDDG GENSNISRRR HRQQNPSEAA SPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-31M-type_MADS family protein