PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY17714.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 548aa    MW: 60778.6 Da    PI: 8.4757
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY17714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS245.62.1e-7524545346267
        GRAS  46 teALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRi 144
                 teALa r+ar +++l+++ pp+e +  ++++   al+++++vsPi kf h+t+N+ +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++Ri
  TEY17714.1 245 TEALALRVARLWPQLFHITPPRELE--HVDD--DALRVLNQVSPITKFVHFTCNEILLRALEGKDRVHIIDFDIKQGLQWPSLFQSLASRASPPSHVRI 339
                 8**********************98..2333..5889************************************************************** PP

        GRAS 145 TgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvve 243
                 Tg+g+    sk+el etg+rLa fAe++++pf+f++ v++rled++l++L+vk++E+++ n+v+qlh++l e  +l++    +L l++s +++vvv++e
  TEY17714.1 340 TGIGE----SKQELMETGDRLAGFAEAFNLPFQFHP-VVDRLEDVRLWMLHVKEKETVVANSVFQLHKMLYEGSALRE----FLGLIRSSNAQVVVMAE 429
                 *****....***************************.7********************************98888888....***************** PP

        GRAS 244 qeadhnsesFlerflealeyysal 267
                 qea hn+++F +r++++l+yysa+
  TEY17714.1 430 QEAAHNEATFDARLFNSLKYYSAV 453
                 **********************97 PP
2GRAS63.44.7e-20455533301373
        GRAS 301 egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.....eesgslvlgWkdrpLvsvSaW 373
                 +g++r+erhe++ kW++ +e+ GF+ v +se++  q +++l++++ ++ yrve     ++s sl+l W+d+pL++vSaW
  TEY17714.1 455 RGDKRFERHEKFDKWQQLMEQGGFRCVGVSERELLQGQMMLKMYSsNHNYRVEvqqgsSSSSSLTLNWSDQPLYAVSAW 533
                 6899*****************************************8889****666655589999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    
MLAGCSSTLL SPRHRLRSEA SAQFQACHIP AMSTQRLDLP CSFGRKEASR RQLVRQVGIS  60
VDKGIESKSS LRQNIKLPPV AAERRGEFWG RSKKRYAATD EGSNYMSRVK KRKSGNGKSE  120
EESGEERDER GFFDLPPLPP LSNVPWFDSV VTEVTDSGMS KDVHPHREVS ASGSSSTSSG  180
SHSLALGLGS SNPTVEREAV GNGSSSRNPS EAPRTLLQPA IALLGSASLP PHEVPLYIAS  240
SPTSTEALAL RVARLWPQLF HITPPRELEH VDDDALRVLN QVSPITKFVH FTCNEILLRA  300
LEGKDRVHII DFDIKQGLQW PSLFQSLASR ASPPSHVRIT GIGESKQELM ETGDRLAGFA  360
EAFNLPFQFH PVVDRLEDVR LWMLHVKEKE TVVANSVFQL HKMLYEGSAL REFLGLIRSS  420
NAQVVVMAEQ EAAHNEATFD ARLFNSLKYY SAVVRGDKRF ERHEKFDKWQ QLMEQGGFRC  480
VGVSERELLQ GQMMLKMYSS NHNYRVEVQQ GSSSSSSLTL NWSDQPLYAV SAWAPVNGGG  540
GSSSSLPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193113KKRYAATDEGSNYMSRVKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.11e-117GRAS family protein