PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY18022.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 202aa MW: 22648.6 Da PI: 8.2211

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY18022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k Fs+ L H +H TEY18022.1 67 FRCMICNKAFSSYQALGGHRASH 89 89***********9999998887 PP
2	zf-C2H2	12	0.00062	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k F++ L H r+H TEY18022.1 119 HECPICFKIFPSGQALGGHKRSH 141 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MFPCGRSLGG HMRYSDESSL DLSSSSSEQE EVAFTLILLS MDCTNSDSNN NNRIKSNRND 60 QSEDNKFRCM ICNKAFSSYQ ALGGHRASHK KFKGCCAPTT TTTTNPPHNL QDCKKSKDHE 120 CPICFKIFPS GQALGGHKRS HLITDQPKIN PTGHLRVEET QAPQVRRFLD LNLPAPVEEE 180 CNVELKPWWI GAARPNLRLK CL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-29	C2H2 family protein