PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY18452.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 302aa MW: 33027.1 Da PI: 5.26

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY18452.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.7	2.1e-07	5	37	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ +++ + fC+ ++ +lC+ C H TEY18452.1 5 KLCDSCKSASAAVFCRADSAFLCRACDADVHAA 37 68*************************999954 PP
2	zf-B_box	30.5	7.5e-10	47	92	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++++ C+ + lC+ C +H+ H++vp+ TEY18452.1 47 VWICEVCEQAPASFTCKADAAALCAACDADIHSAnplarrHDRVPV 92 689*****************************66899999999986 PP
3	CCT	70.2	5.3e-24	244	288	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea+++RY+eKrk+R+FeK+irY+sRKa+Ae+RpR+KGrF+k++e TEY18452.1 244 REARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRSE 288 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MITAKLCDSC KSASAAVFCR ADSAFLCRAC DADVHAANKL ASLHGRVWIC EVCEQAPASF 60 TCKADAAALC AACDADIHSA NPLARRHDRV PVSPFYDAAA ASSEEEAEAA SWLLPDPNSK 120 IEEESGSPEY MSMFSDMDPY LDLDLKCKPH QIVDSEQKHY SAADGVVPVQ DKPEYGSGHY 180 VPGPVVDGFP TYEMDYPSPK PFMYNFTSQS ISQSVSSASM EVGVVPEADG SESAAAVAVV 240 GMDREARVMR YREKRKNRRF EKTIRYASRK AYAETRPRIK GRFAKRSELE VESAAYGVVP 300 SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	4e-71	CO-like family protein