PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY18949.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 168aa MW: 18769.7 Da PI: 8.0471

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY18949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.7	1.7e-42	13	113	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA++r++dPvyG++g i++lqqq++ l+ael+++++ TEY18949.1 13 PCAACKLLRRRCAQECPFSPYFSPNDPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLQDPVYGCMGAISSLQQQVQVLQAELDAVRN 111 7***********************************************************************************************998 PP DUF260 100 el 101 e+ TEY18949.1 112 EI 113 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MLGHTGTLNT TTPCAACKLL RRRCAQECPF SPYFSPNDPH KFASVHKVFG ASNVSKMLME 60 VPESQRADAA NSLVYEANVR LQDPVYGCMG AISSLQQQVQ VLQAELDAVR NEILKYKYKL 120 EESNMLPSSH VSLLSSEGNV LPTKLRRVIV YKMELSIIVN FQCVCWEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	5e-67	LBD family protein