PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY19236.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

YABBY

Protein Properties

Length: 237aa MW: 26356.4 Da PI: 9.255

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY19236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	143.8	1.8e-44	63	205	4	163
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 + +se+vCyv+C+fCnt+lav +P + l+ ++tv+CGhC++l ++ + +sq +h ++ + +++ +k +sas+s s TEY19236.1 63 QPASEHVCYVRCTFCNTVLAVGIPCKRLLDTLTVKCGHCSNLSFLSTKPQSQGHC-YDH-----------QTSLHYQAFCNEFKKGQSASSSS-----S 144 5689**********************************986544444333222.222...........33445555544444444333333.....3 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ++++ ++p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + TEY19236.1 145 TSSEPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 205 46678899999**********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MLVSYEKLSN PRISSLVLSP PQALIFTLYI ASFSINMLIH FLFPFLFISH IIPSTFITMD 60 LAQPASEHVC YVRCTFCNTV LAVGIPCKRL LDTLTVKCGH CSNLSFLSTK PQSQGHCYDH 120 QTSLHYQAFC NEFKKGQSAS SSSSTSSEPS SPKAPFVVKP PEKKHRLPSA YNRFMKEEIQ 180 RIKAANPEIP HREAFSAAAK NWARYIPNTP QMNASTSTNK LNIGVISTAA FVYSNEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-63	YABBY family protein