PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY19307.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 625aa    MW: 68432.2 Da    PI: 6.4595
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY19307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.21.6e-23121222199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f k+lt+sd+++ g +++p+ +ae++        +++ +  t+  +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF   + +++ l
  TEY19307.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGVVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAENGDL 215
                 89****************************986445444..8999*********************************************..4488999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  TEY19307.1 216 CVGIRRA 222
                 ****997 PP
2Auxin_resp110.81.4e-36283366183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 aa+ a+++++FevvY+Pra+++eFvv+ + v++al+v+++ GmRfkmafetedss++++ +Gt+++v+  d ++WpnS+Wr+L+
  TEY19307.1 283 AASVAANGQPFEVVYYPRAGSPEFVVRESAVRAALRVQWCSGMRFKMAFETEDSSRISWfMGTISSVQVDDAIHWPNSPWRLLQ 366
                 68899*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    
MINVMHSLSN PMNQMENCLD PQLWHACAGG MAQIPPPNSK VYYFPQGHAE HANENVDFMK  60
FPRVSPLVLC RVASIKYLAD SESDEVFAKI RLVPLVGSES DVCEDERGFE RSEETERANS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILAKDVHGVV WKFRHIYRGT  180
PRRHLLTTGW SNFVNQKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP EVSCGWNTGI  240
PALQGGFSGF LGESVGLGGR RGGGGDLGLK ERDDVKAEAV VEAASVAANG QPFEVVYYPR  300
AGSPEFVVRE SAVRAALRVQ WCSGMRFKMA FETEDSSRIS WFMGTISSVQ VDDAIHWPNS  360
PWRLLQVVWD EPDLLHNVKR VNPWLVELVS TMAAGHGHGL SPFSPPRKKP RLPQPTEFPY  420
GQFPMGTLVT NPLSPSSPLC CLPDNIPAGV QGARHARFEP PPSDLQYTKL QPFDFKLLDY  480
AGQFPRLLSS YPASSSLMKT GSPLHEVKKI NEAKTPMFLL FGQPILTAEQ ISQSHSEGNN  540
SSDGNQENTA NVSNGSGSAV IQNFPLEASS DGEFGMERSE MSSSVLYNDA RGNAKHIGDE  600
PFGEFIKNAR RLTIVMDSGS VNLGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258265GGRRGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein