PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY19308.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 266aa    MW: 29051.7 Da    PI: 6.2433
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY19308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.8e-17191224134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C +tkTp+WR gp g+ktLCnaCG++++  +
  TEY19308.1 191 CLHCEVTKTPQWRAGPMGPKTLCNACGVRHKTGR 224
                 99****************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEPELIDEID CGNFFCQMED LIEFPPHIEC DDANVVSSSD YKDFPTWDEA LQGCDSLFSV  60
TSASDLAAEL SVPYEDIVQL EWLSTFMEDS FSGSSSSSSS PTSGGNVMPL SPVHLGPQRA  120
RSKRPRPPAF NPKPAIRLVS PSSSCVENPR SASSPESDSF AESLPSKKSK KIKIRLPANP  180
TGQDAPPVRK CLHCEVTKTP QWRAGPMGPK TLCNACGVRH KTGRLFPEYR PAASPTFVPS  240
LHSNSHKKVV EMRCRAEPRN AADTSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123127KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-40GATA family protein