PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY19744.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 153aa MW: 16654.7 Da PI: 8.4802

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY19744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.7	2.3e-44	11	109	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cv+apyfp e+p+kfanvhk+FGasnv+kll++l +++r da+ssl+yeAear+rdPv+G+vg i+ lq+q+++l++el+++++ TEY19744.1 11 PCAACKFLRRKCSPGCVFAPYFPPEEPHKFANVHKIFGASNVSKLLHDLLPHQRGDAVSSLAYEAEARVRDPVHGCVGAISFLQKQVDRLQKELDAANA 109 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MASSTSSYNP PCAACKFLRR KCSPGCVFAP YFPPEEPHKF ANVHKIFGAS NVSKLLHDLL 60 PHQRGDAVSS LAYEAEARVR DPVHGCVGAI SFLQKQVDRL QKELDAANAD LIRFAAGGGG 120 GGGVFQTPNT YTFPYNYHSP WNTSYNPHGG RDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	2e-70	LBD family protein