PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY19917.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 214aa    MW: 24603.5 Da    PI: 8.1759
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY19917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.78.6e-25958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien   rqvtf+kRr+g+lKKA+ELSvLCdae+ + i+s +gklye +
  TEY19917.1  9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFILSAHGKLYELA 58
                79*********************************************965 PP
2K-box51.25.4e-18831777100
       K-box   7 ksleeakaeslqqelakLkkeienLqreqRhllGedL.esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 k++++++   l++e++ Lk+e+e Lq+ +R + G +  + ++l+eL  Le++Le+ + ++Rs K++++ ++i+ l++ke  lq + + L++k++e
  TEY19917.1  83 KEKQANEFMDLKEEINLLKNETEILQKGIRYISGGGApGAMTLNELSVLEKHLETWIYQVRSAKMDIMAQEIQLLKNKEGILQAAYNHLQEKIDE 177
                 44667777889*********************98775389****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MARGKTQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFILSA HGKLYELATN  60
GSMKSLIDKY TKYSKEFTAE EPKEKQANEF MDLKEEINLL KNETEILQKG IRYISGGGAP  120
GAMTLNELSV LEKHLETWIY QVRSAKMDIM AQEIQLLKNK EGILQAAYNH LQEKIDEQYG  180
MIELTPMLTN IQYPLTTNIN QYPLTIPNQE IYQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.15e-70MIKC_MADS family protein