PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY19920.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 236aa MW: 27354.4 Da PI: 9.9121

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY19920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.1	1.5e-30	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++ rqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ TEY19920.1 9 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 58 79***********************************************8 PP
2	K-box	79.8	6.7e-27	65	144	14	93
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 ++ +qqe++kL ++i++Lq ++Rhl Ge+L+sL++keL+qLe++Le+++++iR kK+el+le++e l k+ k l+ ++ + TEY19920.1 65 SKFYQQESRKLSQQIQMLQDTNRHLRGEGLSSLNVKELKQLESRLERGISRIRGKKHELILEETECLLKRVKFLHYNQPN 144 4789******************************************************************9999877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MGRGKIEIKR IENNTSRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYANN 60 KVLVSKFYQQ ESRKLSQQIQ MLQDTNRHLR GEGLSSLNVK ELKQLESRLE RGISRIRGKK 120 HELILEETEC LLKRVKFLHY NQPNYNTKSM LFLDSFKDSI TALFLLQEAQ LEQENASLRA 180 KIQENEKLQQ LSMMPGGQDF ALQAYYARNM LQLNMMESGS GYEAASSDRK TVHLGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09960.4	7e-66	MIKC_MADS family protein