PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY20298.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 196aa    MW: 22411.5 Da    PI: 10.207
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY20298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.79.9e-111048240
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                 ie++  r  t  kR++g++KK + L +LCd+ +++i  
  TEY20298.1 10 MIEEEKSRILTMKKRKKGLIKKLHQLTTLCDVPACMIFH 48
                69999*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MGRGKLKMEM IEEEKSRILT MKKRKKGLIK KLHQLTTLCD VPACMIFHDP TTNSTSVWPE  60
EDPDKVRSLI EAYKAKKNDP SGGVREYLLS NFFDQRQRQA EEELEKLRKN NVEGMFPTWD  120
DRLNFMDEAQ LRELAATVRG KAENHNQQRR RERKHCGEGG GASSKAAMAD REALIGARSQ  180
SRRNGAKAPW SSAITH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.17e-11M-type_MADS family protein