PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20422.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 368aa MW: 41178.9 Da PI: 5.5054

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.8	2.1e-08	50	81	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++ +++lfC++++ +lC+ C e+H+ TEY20422.1 50 KPCDSCKAVPATLFCHTDSAFLCAACDGEIHS 81 67*****************************4 PP
2	zf-B_box	23.5	1.1e-07	95	135	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ +e+ +++ C+ + lC +C +H+ H++ TEY20422.1 95 ICDVCEQAPATVTCKADAASLCSTCDADIHSAnplarrHER 135 7*****************************65777777775 PP
3	CCT	68.9	1.3e-23	309	351	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea++lRYkeKrk+R+F+K+irY+sRKa+Ae+RpR+KGrF+++ TEY20422.1 309 REARVLRYKEKRKNRRFDKTIRYASRKAYAETRPRIKGRFARR 351 9****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MFHDVCGRDP ESAAPTRRSS YFQKDNSFRE KIWEIDHEIM SSDSWSLTAK PCDSCKAVPA 60 TLFCHTDSAF LCAACDGEIH SPENKPARRH ARVCICDVCE QAPATVTCKA DAASLCSTCD 120 ADIHSANPLA RRHERFPVVP FYDTASATRS PRSVEEFSEE EAEAASWLLP DPNSKPVDES 180 KSPEFNKSTE YLFGDMDPDP YPDPDLDLII MGQKTGRDTT IKGNKQYSAD GVVPVQTERE 240 FGSDLYPGPV VNGYPTYDVE YPVSKPFMYN FTSQSISQSV SSSSLEVGLV PDHNANAEAG 300 PVPLSRIERE ARVLRYKEKR KNRRFDKTIR YASRKAYAET RPRIKGRFAR RLELQVEADA 360 SYGVVPTF

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MFHDVCGRDP ESAAPTRRSS YFQKDNSFRE KIWEIDHEIM SSDSWSLTAK PCDSCKAVPA  60
TLFCHTDSAF LCAACDGEIH SPENKPARRH ARVCICDVCE QAPATVTCKA DAASLCSTCD  120
ADIHSANPLA RRHERFPVVP FYDTASATRS PRSVEEFSEE EAEAASWLLP DPNSKPVDES  180
KSPEFNKSTE YLFGDMDPDP YPDPDLDLII MGQKTGRDTT IKGNKQYSAD GVVPVQTERE  240
FGSDLYPGPV VNGYPTYDVE YPVSKPFMYN FTSQSISQSV SSSSLEVGLV PDHNANAEAG  300
PVPLSRIERE ARVLRYKEKR KNRRFDKTIR YASRKAYAET RPRIKGRFAR RLELQVEADA  360
SYGVVPTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	7e-77	CO-like family protein