PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20839.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 274aa MW: 28580.7 Da PI: 8.2993

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.8	2.3e-39	32	158	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssg..... 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ +++ss ss g TEY20839.1 32 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALaasggaiSQASSISS------Glhhkm 124 789***************************************************************999777533322222222222......133334 PP TCP 89 .................................k 89 TEY20839.1 125 delganrsswpmiggnlgrstagmwppagfgfqT 158 4566666666666666665555555555555431 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MDPKSSEQPQ SSACGEPKAA AERDDSKKLA LAPKRSSNKD RHTKVEGRGR RIRMPALCAA 60 RIFQLTRELG HKSDGETIQW LLQQAEPSII AATGSGTIPA SALAASGGAI SQASSISSGL 120 HHKMDELGAN RSSWPMIGGN LGRSTAGMWP PAGFGFQTSS SSSSSSGPSM AAAAAAENSA 180 YLQKMGFPGF ELPGGNLGAM SFTSILSGGG GQQLPGLELG LSQDGNIGVV NPQAFSQFYQ 240 QMATPAARVA HHHQQHHHQQ NLSPKDDDSQ ESGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-50	TCP family protein