PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY21143.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 237aa    MW: 25811.6 Da    PI: 4.9507
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY21143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.56.1e-171761347
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                ienk    v+fskRr g+ KKA+ELS+LC+++v  iifs++g  +
  TEY21143.1 17 IENKDDLLVSFSKRRVGVYKKASELSTLCAVDVGAIIFSPSGIPH 61
                999999**********************************99655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MSEKKTRGRQ KIPIRLIENK DDLLVSFSKR RVGVYKKASE LSTLCAVDVG AIIFSPSGIP  60
HSFFTPDFDS VVHGCRRDGD APQTRIHEIN RRLDDVVEQQ EREERREKHL GGGGEMGWWE  120
FPLESLDAEQ VREQIEWFRT FREKIKGRVE ELNNGGASSA AAAGDGGGVL GGESLFTAPV  180
SDEAYGFAPG FDGGRYGYGA AAFGGGIENE YFPGPADLGG DGYGYLPRGY GEAGPSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29962.17e-20M-type_MADS family protein