PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY21174.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 214aa MW: 25347.2 Da PI: 8.9161

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY21174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	56.2	4.4e-18	10	39	1	30
S---SHHHHHHHHHHHHHHHHHHHHHHHHH CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvL 30 krien+snrqvt+skRrngi+KKA+E+SvL TEY21174.1 10 KRIENSSNRQVTYSKRRNGIMKKAKEISVL 39 79***************************9 PP
2	K-box	60.4	7.4e-21	47	137	1	91
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqR.hllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 y+k sgk+l++ak+e+l++e++++kke++++q ++R hl+Ged+++Ls+keL+ Le++Le+ +++ +sk++e+++ + ++ + e e+q+ TEY21174.1 47 YHKLSGKRLWDAKHEHLDNEINRIKKENDSMQIQLRlHLKGEDISNLSYKELMVLEEALENRITTLKSKQMEFVRIMRKHNEMEE-ENQNLL 137 7899**************************77766*********************************9887666555444.444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MGRGNKIEIK RIENSSNRQV TYSKRRNGIM KKAKEISVLL VDMLDQYHKL SGKRLWDAKH 60 EHLDNEINRI KKENDSMQIQ LRLHLKGEDI SNLSYKELMV LEEALENRIT TLKSKQMEFV 120 RIMRKHNEME EENQNLLFKL WQMHLDPMDD NVMEAQGVYD HQVADYEAQQ QMPFAFRMQP 180 NLQGVSKGFL LTYKFTNNCT TLDLVGVNLW KTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	2e-49	MIKC_MADS family protein