PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY21508.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 132aa    MW: 15044.8 Da    PI: 10.0058
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY21508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.61.4e-271058250
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                ri++ + rqvtfskRrng+lKKA+EL +LCdaeva+iifsstgkly++ 
  TEY21508.1 10 RIDDMTSRQVTFSKRRNGLLKKAKELAILCDAEVALIIFSSTGKLYDFG 58
                89********************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MGRGKIVIRR IDDMTSRQVT FSKRRNGLLK KAKELAILCD AEVALIIFSS TGKLYDFGST  60
ASMKSVIERY NKAKEEPHQL LNSISEVKVI FLAKCQSYII IHETWMIFPC PTHFLVCTSL  120
SMKSIDLMNQ KV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.11e-47MIKC_MADS family protein