PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY21529.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 414aa MW: 45491.9 Da PI: 8.1558

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY21529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78	9.3e-25	182	226	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e+ TEY21529.1 182 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEA 226 79****************************************996 PP
2	QLQ	61.1	3e-21	118	154	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k TEY21529.1 118 GPFTPSQWMELEHQALIYKYITANVPIPSYLLNPIRK 154 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MDFALLPSDT AFSLQNGDAD KPKYCHGFGF LKQDRAINED DLREFKMSKN SSCGEGSLQR 60 SNGCGLSSAE MLSFSSPNPQ PLTLPYYHYS SNAFARNAVC VVCVVGMNGG SMQHGVRGPF 120 TPSQWMELEH QALIYKYITA NVPIPSYLLN PIRKAFEVVG FSSLRSNPLG WNGFHLGYSS 180 TDPEPGRCRR TDGKKWRCSR DAVVDQKYCE RHMNRGRHRS RKPVEAQSAI ASNTTTAKPT 240 VARSIVENTT SLSKTKPKDS QHQDWEGNEF GLVCSDSLVN PLNRSELRQF MDQPDRDVDR 300 TQLSISMASS PPRSGLSREL EMGLGLGNRP SSNNWAPISW EPSAIGGPLG EVLHNTTTTT 360 TSDAKQLNLI ERWDSPRLDA SPTGVLQRGA FASLSNSSVA GSPPHDVSAY PSLL

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MDFALLPSDT AFSLQNGDAD KPKYCHGFGF LKQDRAINED DLREFKMSKN SSCGEGSLQR  60
SNGCGLSSAE MLSFSSPNPQ PLTLPYYHYS SNAFARNAVC VVCVVGMNGG SMQHGVRGPF  120
TPSQWMELEH QALIYKYITA NVPIPSYLLN PIRKAFEVVG FSSLRSNPLG WNGFHLGYSS  180
TDPEPGRCRR TDGKKWRCSR DAVVDQKYCE RHMNRGRHRS RKPVEAQSAI ASNTTTAKPT  240
VARSIVENTT SLSKTKPKDS QHQDWEGNEF GLVCSDSLVN PLNRSELRQF MDQPDRDVDR  300
TQLSISMASS PPRSGLSREL EMGLGLGNRP SSNNWAPISW EPSAIGGPLG EVLHNTTTTT  360
TSDAKQLNLI ERWDSPRLDA SPTGVLQRGA FASLSNSSVA GSPPHDVSAY PSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-63	GRF family protein