PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY21678.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 233aa MW: 24950.3 Da PI: 8.4727

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY21678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134.1	5.4e-42	51	150	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe +r d+++slvyeA++r+rdPvyG++g i++lqqq+++l+ael+++++ TEY21678.1 51 PCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLMEVPEPQRADTANSLVYEANVRLRDPVYGCMGAISALQQQIQSLQAELNAVRA 149 7***********************************************************************************************998 PP DUF260 100 e 100 e TEY21678.1 150 E 150 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MSREREGFEE IGKKLKTEID GGKSSSPPPL SMSMGRRHTF GTPGSLNTIT PCAACKLLRR 60 RCAEECPFSP YFSPHEPHKF AAVHKVFGAS NVSKMLMEVP EPQRADTANS LVYEANVRLR 120 DPVYGCMGAI SALQQQIQSL QAELNAVRAE ILRYKYREAA NSIIASTNAA LAVSVAELPQ 180 APPTPTPSQT APAAAPPPSV VISSTSSAPA LYASPSSTAS YSSISNNHIP FFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	5e-74	LBD family protein