PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY21908.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 202aa MW: 23658.6 Da PI: 7.5785

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY21908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.7	2.7e-20	54	106	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eq++ Lee+F +++++ e++e+LA++lgL rqV vWFqNrRa++k TEY21908.1 54 KRKLSEEQVKMLEECFGSEQKLESERKERLAAELGLYPRQVAVWFQNRRARWK 106 45899***********************************************9 PP
2	HD-ZIP_I/II	113	1.9e-36	53	144	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kr+ls+eqvk+LEe+F +e+kLe+erK++la eLgl prqvavWFqnrRAR+k+ +l ++y++Lk+ +d+ + +++rLe+e +L+e+l+e TEY21908.1 53 RKRKLSEEQVKMLEECFGSEQKLESERKERLAAELGLYPRQVAVWFQNRRARWKSNKLQEEYSKLKSIHDNAVLHKCRLETELLKLKEQLQE 144 8****************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MNSEHHLISH YYPDSIYTHF VPQHEAASKP KARRRRRKSK GCEGGGEGDG VMRKRKLSEE 60 QVKMLEECFG SEQKLESERK ERLAAELGLY PRQVAVWFQN RRARWKSNKL QEEYSKLKSI 120 HDNAVLHKCR LETELLKLKE QLQEAEKEIQ RLSDGFSSNS PCSSFSMEAQ PFLGEFGMEG 180 LENVFYNSDQ NNGMEWDNLY YM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	56	RRRRRKSKGCEGGGEGDGVMRKRK
2	34	57	RRRRRKSKGCEGGGEGDGVMRKRK
3	35	40	RRRKSK
4	35	58	RRRRRKSKGCEGGGEGDGVMRKRK
5	36	59	RRRRRKSKGCEGGGEGDGVMRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	2e-35	HD-ZIP family protein