PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY21931.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 293aa    MW: 32885.2 Da    PI: 8.4059
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY21931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.92.2e-1078102126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 ykt++C  f + GtC+ Gd+C+FaHg
  TEY21931.1  78 YKTRICAKFTE-GTCRNGDQCTFAHG 102
                 9**********.*************8 PP
2zf-CCCH261.6e-08133155325
                 S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                 +++C+ f+ + +C+yGd+C+F H
  TEY21931.1 133 MKICKKFYNGEECPYGDKCNFLH 155
                 579******66************ PP
3zf-CCCH36.39.3e-12192216126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +k+++C+++   G+C+yG+rC+FaHg
  TEY21931.1 192 WKMRICSRWEM-GQCNYGERCHFAHG 216
                 89*********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSFPDPTQPL NPFTSPPYSG NAAAYWPPFW AGSEQQQIPQ FNQSKRPRAS ENPPNFPPFQ  60
AMNQTNAPIN KGTSHIFYKT RICAKFTEGT CRNGDQCTFA HGAEDLREPP PNWQEIIREK  120
ERGGDDQRLI HRMKICKKFY NGEECPYGDK CNFLHERPPK KLKVEMPGQR ESSAISIGVM  180
GSVGEVDQVA GWKMRICSRW EMGQCNYGER CHFAHGSSDL RYSGSIDEGE ATNAARKVAS  240
VSPLPAPCGA AVAVAPVEEK RISKWKLTKK INRIYGDWLD NLTPPHLSPE AMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.15e-61C3H family protein