PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY22809.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 853aa MW: 95188.3 Da PI: 9.0471

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY22809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	58.6	8.5e-19	736	769	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp g+k+LCnaCG+++rk + TEY22809.1 736 CSDCHTTKTPLWRSGPKGPKSLCNACGIRQRKAR 769 *******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MRLGDGNRVR NILFLAAKHS HSENPFPMAN IPEISSLFAV LASNLRSPDP MAGDEVSLAI 60 SNLNRSLNPS DAAAVRILDT ALSLMHFTVP QVHDSVIEFT LKSLIAVLSS SIECKVARID 120 KQMNLRVGGL ILKSDCANVL EDCAHILEKL DGQKGDLCYS LLYNVFRVAV LAPCFPHALL 180 SDSTLDAKCR NVNATALANV VRYIPKQCTF KNGEIPLRLL SWHLDPMILK QDERLEIQNN 240 FPGDFTINVH RDQGSVAQVV LNDDYARRKE IAHVSYSVRL DLNNRGLASL MELQSEIVGH 300 MLDIISRPMW WGISMDIGSK LPFSSAYFPY EHQLLRILAG PICQEYFKHL LQKVSSSESV 360 AGGHLHKTSR KAATDINSVN HQSMWAMVMN FPCWFSFASM MIFCNTNNVS LCSESISGYL 420 KPCVTHVPEV TSPAEAVKLV HCVKCSSLNK CREVTNVDKE AKKPKSCVKN EIALYELDTY 480 AVSLWLKEYR DTYVKLLAEK VGVSTSNTKG FGIHQNLLLR RIPLGILLLH HCHLSTEGCS 540 LLLHYSATGT VQDFSVTQNP RQGRKRWKHD TQMSSLSCIQ QCTKAEAIAG CKTVFDITDV 600 ADSISHSMCN DEEGLNFVCQ VKMKTCNYLL QCVKRLIEIK LDEDGIRMRR DLRTRKIRWR 660 HQRKDVFQDN KDLDCVEYYG CHRGSSSCYE IKNKVENGVK WISSKAKRLD AAKIKVKKVM 720 MASSGLNLSY NPIRVCSDCH TTKTPLWRSG PKGPKSLCNA CGIRQRKARR AMAAAATNVG 780 VAPPQPMKVK ASKRCKVGGG GSSTRNSIGK KMEFEDFLIN LSNKLASIHR VFPQDEKEAA 840 ILLMALSSGL VHG

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MRLGDGNRVR NILFLAAKHS HSENPFPMAN IPEISSLFAV LASNLRSPDP MAGDEVSLAI  60
SNLNRSLNPS DAAAVRILDT ALSLMHFTVP QVHDSVIEFT LKSLIAVLSS SIECKVARID  120
KQMNLRVGGL ILKSDCANVL EDCAHILEKL DGQKGDLCYS LLYNVFRVAV LAPCFPHALL  180
SDSTLDAKCR NVNATALANV VRYIPKQCTF KNGEIPLRLL SWHLDPMILK QDERLEIQNN  240
FPGDFTINVH RDQGSVAQVV LNDDYARRKE IAHVSYSVRL DLNNRGLASL MELQSEIVGH  300
MLDIISRPMW WGISMDIGSK LPFSSAYFPY EHQLLRILAG PICQEYFKHL LQKVSSSESV  360
AGGHLHKTSR KAATDINSVN HQSMWAMVMN FPCWFSFASM MIFCNTNNVS LCSESISGYL  420
KPCVTHVPEV TSPAEAVKLV HCVKCSSLNK CREVTNVDKE AKKPKSCVKN EIALYELDTY  480
AVSLWLKEYR DTYVKLLAEK VGVSTSNTKG FGIHQNLLLR RIPLGILLLH HCHLSTEGCS  540
LLLHYSATGT VQDFSVTQNP RQGRKRWKHD TQMSSLSCIQ QCTKAEAIAG CKTVFDITDV  600
ADSISHSMCN DEEGLNFVCQ VKMKTCNYLL QCVKRLIEIK LDEDGIRMRR DLRTRKIRWR  660
HQRKDVFQDN KDLDCVEYYG CHRGSSSCYE IKNKVENGVK WISSKAKRLD AAKIKVKKVM  720
MASSGLNLSY NPIRVCSDCH TTKTPLWRSG PKGPKSLCNA CGIRQRKARR AMAAAATNVG  780
VAPPQPMKVK ASKRCKVGGG GSSTRNSIGK KMEFEDFLIN LSNKLASIHR VFPQDEKEAA  840
ILLMALSSGL VHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26150.1	2e-26	GATA family protein