PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY23430.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 316aa    MW: 32970 Da    PI: 6.0307
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY23430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF69.14.2e-224793248
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                +ien++n qvtfskRr+g++KKA+ELS+LC+ae a++++s+ +k + 
  TEY23430.1 47 KIENDTNLQVTFSKRRAGVFKKASELSTLCGAECALVVYSPGDKPHS 93
                79**************************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MNASGDGNNN YPMHPQGGDE DGDDYMLHHE NEQRRKGKGR QKIEMAKIEN DTNLQVTFSK  60
RRAGVFKKAS ELSTLCGAEC ALVVYSPGDK PHSFGHPSVE VVTTRFLQAD IGGGAPITEA  120
DRAVMAHYQA AEQERNREVV AVEMQVDQAK QRRKELDGLP PVLQLESLNY QQLDQLRNSV  180
LMYKQGVQAQ FSGGAGVYGY GGGGAAAGYG QNVQYPPMGY GTAGYNYGAP SAGVVPYNAG  240
IAGAQGGANY GGFPGGVQGE ANYGGYPGSS DGNVGGAQGG VNYGGFPGGS GGNVDGGQGG  300
ANYGGFSGNY HHHPGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.17e-31M-type_MADS family protein