PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY23602.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 467aa    MW: 51749.7 Da    PI: 5.2025
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY23602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS261.43.2e-801284662374
        GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 v+ L++ Ae++++++l+l q +  rl+++  sp+g+p+qR+a+yf+eAL++ l++         ++++    + +++++a+k+fs +sPi+ fs +ta 
  TEY23602.1 128 VDELIRLAECLETNSLQLGQIIAVRLNQRlHSPSGKPLQRAAFYFKEALRTLLTG---------STRSP---DLIDTIKAQKTFSTISPIPMFSGFTAT 214
                 678*************************99*************************.........34444...59************************* PP

        GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 qa+l+av+g+ + vH++Df+i+ G++W+++++++++ ++ +p lRi +++ ++   + e   ++e+L++fA+el+v fe++++  +++e++ +++ +++
  TEY23602.1 215 QAVLDAVDGCaTSVHVVDFEIGLGGHWASFIREISE-ARAKPALRISALVTED--FSAESALVRENLTQFARELNVVFEIDFVPIRNFECVYFNSVKFR 310
                 **********999**********************8.46779*********44..7888999*********************9*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 +gE++aV l+ +++r +          + +L  +++lsP+vvv+v+ e   ++ s+ + ++e le+ys++++slea+     e+++k+E+ ++ ++iv+
  TEY23602.1 311 HGEKVAVVLSPAIFRRV---------GTGFLTDLQRLSPHVVVHVDGEG-FGAVSYRQAVIEGLEFYSTVMESLEAG--GGGEWMRKIEEYVVYPKIVE 397
                 ***************98.........368*****************996.5799********************999..6789**************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  v   ga+          Wre++  aG+k+v +s++a+ qa++l+r+v+++g++v +++g+++l+W+dr Lv++SaWr
  TEY23602.1 398 GVGRMGAA---------GWREAMVGAGLKQVGMSQFAEFQAECLVRRVQVRGFHVSKRHGEMMLCWHDRVLVATSAWR 466
                 99999998.........9***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MKLPFPTSNH SPKATSIAAT SPPYEPKSVL DLRGSPSPAT ELEDHVLISP QLEEWDSLMR  60
ELGLQDDPNP NPNPNSNPNL PDFPPPTNSF DSSPFISTNF GLLSDIPNYT QNPDTADVND  120
WNPGFDYVDE LIRLAECLET NSLQLGQIIA VRLNQRLHSP SGKPLQRAAF YFKEALRTLL  180
TGSTRSPDLI DTIKAQKTFS TISPIPMFSG FTATQAVLDA VDGCATSVHV VDFEIGLGGH  240
WASFIREISE ARAKPALRIS ALVTEDFSAE SALVRENLTQ FARELNVVFE IDFVPIRNFE  300
CVYFNSVKFR HGEKVAVVLS PAIFRRVGTG FLTDLQRLSP HVVVHVDGEG FGAVSYRQAV  360
IEGLEFYSTV MESLEAGGGG EWMRKIEEYV VYPKIVEGVG RMGAAGWREA MVGAGLKQVG  420
MSQFAEFQAE CLVRRVQVRG FHVSKRHGEM MLCWHDRVLV ATSAWRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-125GRAS family protein