PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY23636.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 248aa MW: 29102.5 Da PI: 7.8555

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY23636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.5	1.5e-13	4	46	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+++W++Ia+++ +k+c++rw++ TEY23636.1 4 RGHWRPAEDEKLRELVERYGPHNWNAIAEKLH----GKSCRLRWFNQ 46 899***************************....5*****996 PP
2	Myb_DNA-binding	56.4	6.7e-18	53	96	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ +++ +G++ W+ Iar ++ gRt++ +k++w+ TEY23636.1 53 RSPFTEEEEERLLACHRIHGNR-WAIIARVFP-GRTDNAVKNHWHV 96 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MCSRGHWRPA EDEKLRELVE RYGPHNWNAI AEKLHGKSCR LRWFNQLDPR INRSPFTEEE 60 EERLLACHRI HGNRWAIIAR VFPGRTDNAV KNHWHVIMAR KCRERSKIYE KRALRNDRES 120 LSSAKIDNGN ILSICRGKNM SFSPLMENFQ ERYNLQVVGW NQPQFCDTPI TRMKSDEERS 180 KGVEFYNFLQ INTDSNRSEV IDNARKEKQG DDGDKEEEEV DQKEASFQRN EASSSPPFID 240 FLSVGNSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-80	MYB family protein