PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY24017.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 303aa    MW: 34724.6 Da    PI: 8.7513
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY24017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.83.8e-086185126
                --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                yk e C+ f+  G C yG++C+FaH 
  TEY24017.1 61 YKSEMCNLFQM-GKCYYGENCHFAHN 85
                899****8888.*************7 PP
2zf-CCCH25.71.9e-08132157327
                 S---SGG.GGTS--TTTTT-SS-SSS CS
     zf-CCCH   3 telCrff.artGtCkyGdrCkFaHgp 27 
                 t+lC ++  r+G C+yG++C++aHg+
  TEY24017.1 132 TKLCARWvERFGSCPYGEKCTYAHGK 157
                 666777646899************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MNRDDDSQIS GPVNFGGKIA YDHRPQPRNP NHQQPFSDHG FKRPRPRTPL TVNRSKLSIP  60
YKSEMCNLFQ MGKCYYGENC HFAHNLRQIR GLEGVAMAEP FSERRRFFSG GRGCNYHPYQ  120
SFGRDEGGLN RTKLCARWVE RFGSCPYGEK CTYAHGKEGG LFNQLFLVVF RIELLSVITS  180
EYCLNQHIVS VEFLLLVPHY NYGSKLMLVD LVFHRIFGSF LFFGASELQL PGYYAEMVRR  240
RDSRSMLDSL PTFAGSCKMG IETAKEEGGV HIMKWDIEKI SEVYADWVGV GHDIHVSLSA  300
VRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14246KRPRP