PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24057.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 225aa MW: 25655.1 Da PI: 8.2289

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	118	140	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F++ L H +H TEY24057.1 118 FRCMICNKGFPSYQALGGHRASH 140 89**********99999998887 PP
2	zf-C2H2	13.2	0.00027	160	182	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H TEY24057.1 160 HECPICLKVFPSGQALGGHKRSH 182 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MAMEVDHKSK HKCKFCRKMF PCGRSLGGHM RSHLINIQST AKKPRKRFSD NRDEDDDDDD 60 DDDREEVALS LILLSMDCIS FEENESRRNK KSRANRNLDL NPSSEVVNSL NQSDCSKFRC 120 MICNKGFPSY QALGGHRASH KKFKGCCAPT IPTEIPKPDH ECPICLKVFP SGQALGGHKR 180 SHLITDHQPK TTRRDFLDLN LPAPVEDELK PWWIHATREP LLSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-26	C2H2 family protein