PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY24097.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 260aa    MW: 29410.9 Da    PI: 9.8241
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY24097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.38.5e-2374121249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                  ie++  r+vtfskRr+g++KKA ELSvLC++++a+iifs  g+ y +
  TEY24097.1  74 LIEDENARTVTFSKRRAGLFKKATELSVLCGTQIALIIFSLGGRAYSF 121
                 69**************************************99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MPLHLKLKST LKMFDEMPKR PMRGLYGDGS HLFSYYGFYF VEYPKVVIFG DSDAGQPPLG  60
KKKSQGRRKI EMKLIEDENA RTVTFSKRRA GLFKKATELS VLCGTQIALI IFSLGGRAYS  120
FGHPDVESII GRFFNTNPTA TAPESSSSSR YRTAMLQEIK EQFDGKSKEL ETKKKRGKEI  180
EEALESSSFH TSDEELDGLD FEQLRQLREK LVKMRDEMRR LANAYGVADV PPMLPVPVLN  240
LAEVAKSRGA SMIPSDWLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.11e-31M-type_MADS family protein