 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY24316.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 179aa MW: 20977.1 Da PI: 7.6225 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 63.4 | 3.2e-20 | 20 | 72 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k
TEY24316.1 20 KKRLSNEQLELLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 72
5569************************************************9 PP
| |||||||
| 2 | HD-ZIP_I/II | 123.9 | 7.7e-40 | 19 | 110 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kk+rls+eq++lLE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk++yda+++++++L++ev +Lr+ lke
TEY24316.1 19 KKKRLSNEQLELLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEYDAVSRDKHKLQQEVMALRAILKE 110
9**************************************************************************************88875 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 179 aa Download sequence |
MKQHAIMEKN MNHLMVDPKK KRLSNEQLEL LENSFQEEIK LDPDRKMKLA KELGLQPRQI 60 AVWFQNRRAR WKGKQLERLY DALKQEYDAV SRDKHKLQQE VMALRAILKE QVAKKQVSTD 120 VSGEETVEST SIPSFEKQHP VVEAEGTSLH QMAECNYMEE YNNTMMIPPY WATSMPSCP |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 19 | 48 | KKKRLSNEQLELLENSFQEEIKLDPDRKMK |
| 2 | 67 | 75 | RRARWKGKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G03790.1 | 4e-42 | HD-ZIP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|