PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24357.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 666aa MW: 73708.2 Da PI: 7.4577

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.7	1.1e-23	117	218	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ ++d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ l TEY24357.1 117 FAKTLTQSDANNGGGFSVPRYCAETIfprldytADPPVQ--TILVKDVHGEVWNFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAENGDL 211 89**************************997556555..8********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY24357.1 212 CVGIRRA 218 **997 PP
2	Auxin_resp	104.5	1.3e-34	284	367	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ +++++Fev+Y+Pras++eF+v ++ v++al+++++ GmRfkmafetedss++++ +Gt+++ +dp rWp+S+Wr+L+ TEY24357.1 284 AATLGANGKPFEVIYYPRASNPEFCVMTSLVKAALQIHWCSGMRFKMAFETEDSSRISWfMGTISSAVVADPARWPDSPWRLLQ 367 56778999**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MESMERSKES EKCLDSQLWH ACAGSMVQMP PVNSNVFYFP QGHFEHVSGN LDLRNCPRLP 60 AYVSCRVSAV KFMADPDTDE VFAKIRLVPV EGNEVDLDKG GAAEVNGIES QDKPSSFAKT 120 LTQSDANNGG GFSVPRYCAE TIFPRLDYTA DPPVQTILVK DVHGEVWNFR HIYRGTPRRH 180 LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKN GIGGGPEVPS QWNPSGGGRA 240 LQYGGFSMFF KEDEGKLSRN GGGNNNGSLI SKGRRVKTED VIEAATLGAN GKPFEVIYYP 300 RASNPEFCVM TSLVKAALQI HWCSGMRFKM AFETEDSSRI SWFMGTISSA VVADPARWPD 360 SPWRLLQVRW DEPDLLQNVK RVNPWSIELV SNLPNIHLSP FSSPHKKLRL PHPPDFPLDG 420 HLPLPAFTGS HPLGSSYPFG CLTDNAPAGI QGARHGQYGI TLSDLHFSKL RSGPFPPDSH 480 RPLDRASIPI RPSNPIVSEP SNDENISCLL TMGTTSIQGS TKSQNRKEVP FVLFGQEIHT 540 AKKISVTCSS DTVSTRRTVN RSDESGFFSN RNDAYERSST DHCKVFMESE DVGRTLNLSL 600 LGSYEELHMK LASMFRVEIA EIAKHIHYLD DTGAVRQLGE EPFSKFSKTA RRLRVVADSS 660 SYSVEV

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MESMERSKES EKCLDSQLWH ACAGSMVQMP PVNSNVFYFP QGHFEHVSGN LDLRNCPRLP  60
AYVSCRVSAV KFMADPDTDE VFAKIRLVPV EGNEVDLDKG GAAEVNGIES QDKPSSFAKT  120
LTQSDANNGG GFSVPRYCAE TIFPRLDYTA DPPVQTILVK DVHGEVWNFR HIYRGTPRRH  180
LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKN GIGGGPEVPS QWNPSGGGRA  240
LQYGGFSMFF KEDEGKLSRN GGGNNNGSLI SKGRRVKTED VIEAATLGAN GKPFEVIYYP  300
RASNPEFCVM TSLVKAALQI HWCSGMRFKM AFETEDSSRI SWFMGTISSA VVADPARWPD  360
SPWRLLQVRW DEPDLLQNVK RVNPWSIELV SNLPNIHLSP FSSPHKKLRL PHPPDFPLDG  420
HLPLPAFTGS HPLGSSYPFG CLTDNAPAGI QGARHGQYGI TLSDLHFSKL RSGPFPPDSH  480
RPLDRASIPI RPSNPIVSEP SNDENISCLL TMGTTSIQGS TKSQNRKEVP FVLFGQEIHT  540
AKKISVTCSS DTVSTRRTVN RSDESGFFSN RNDAYERSST DHCKVFMESE DVGRTLNLSL  600
LGSYEELHMK LASMFRVEIA EIAKHIHYLD DTGAVRQLGE EPFSKFSKTA RRLRVVADSS  660
SYSVEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein