PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24380.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

YABBY

Protein Properties

Length: 184aa MW: 20543.5 Da PI: 9.318

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	50.5	8.3e-16	6	57	5	56
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql 56 se+vCy++C+fCnt+lav +P + l+ ++tv+CGhC+sl ++ + +s++ TEY24380.1 6 PVSENVCYIRCTFCNTVLAVGIPCKRLLDTLTVKCGHCSSLSFLSTKPQSHQ 57 679************************************9977776666654 PP
2	YABBY	92.9	7.9e-29	73	135	101	163
YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 s++++ ++p++p v++PPek+ r Psaynrf+keeiqrik++nP+i hre fs+aaknWa + TEY24380.1 73 SSTSTEPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKSANPEIPHREDFSVAAKNWARY 135 26777888999999***********************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MDLAQPVSEN VCYIRCTFCN TVLAVGIPCK RLLDTLTVKC GHCSSLSFLS TKPQSHQAFC 60 SEFKKVPSLS SSSSTSTEPS SPKAPFVVKP PEKKHRLPSA YNRFMKEEIQ RIKSANPEIP 120 HREDFSVAAK NWARYIPNPN PHQTSTASTS TNKMYFYQMS LINMDGNWSG AKADQEKVGC 180 FKTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	2e-55	YABBY family protein