PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY24398.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 511aa    MW: 56096.6 Da    PI: 4.8274
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY24398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.79.4e-1381415061374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav+++d++la+al++++  la ++  +m+++a+yf+eALa+r+++    ly   pp++++   s+ +   +  f+e++P+lkf+h+taN
  TEY24398.1 141 LVHTLMACAEAVQQEDFKLAEALVKNIGFLAVSQPGAMRKVATYFAEALARRIYK----LY---PPNHQD---SAFNDLLQMHFYETCPYLKFAHFTAN 229
                 689***************************************************9....44...444443...4455455556**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g++rvH+iDf+++qG+QWpaLlqaLa Rp+gpps+R+Tg+g+p++++++ l+e+g+rLa++Ae+++v+fe++ +va++l+dl+  ++++++
  TEY24398.1 230 QAILEAFAGKTRVHVIDFSMKQGMQWPALLQALALRPGGPPSFRLTGIGPPSQDETDHLQEVGWRLAQLAESINVEFEYRGFVASSLADLDAAMFDIRE 328
                 *************************************************************************************************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak.....lpres...eerikvErel 289
                 gE++aVn++++lh+ll++++++e+    vL++v++l+P++++vveqea+hn++ Fl+rf+e+l+yys+lfdsle+          +    +++++++++
  TEY24398.1 329 GETVAVNSIFELHQLLARPGAIEK----VLEVVNRLKPEILTVVEQEANHNGSVFLDRFTESLHYYSTLFDSLESCgggggE---EgvsVQDKVMSEVY 420
                 ************************....*********************************************876333221...134589999***** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 lgr+i+nvvaceg +r+erhetl++W++rl+++GF+ v+l+++a+kqa++ll+ ++ +dgyrv+e++g+l+lgW++rpL+++SaW+
  TEY24398.1 421 LGRQICNVVACEGGDRVERHETLGQWKSRLGSCGFEGVNLGSNAYKQASMLLALFAgGDGYRVDENNGCLMLGWHTRPLIATSAWK 506
                 *************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MKRDLMNPEN FSSSSSSSNM DAGFDELFAV LGYNVNPSDM AQVAHQLERL EQVMSIAPLS  60
DDPVHYNPSD LASWLGSMIS EFDSSSDPFL PSDLVSIPGK ALFPSKTLPP QPKKLKTTPP  120
IPSPPATPLL LVDSQDNGVR LVHTLMACAE AVQQEDFKLA EALVKNIGFL AVSQPGAMRK  180
VATYFAEALA RRIYKLYPPN HQDSAFNDLL QMHFYETCPY LKFAHFTANQ AILEAFAGKT  240
RVHVIDFSMK QGMQWPALLQ ALALRPGGPP SFRLTGIGPP SQDETDHLQE VGWRLAQLAE  300
SINVEFEYRG FVASSLADLD AAMFDIREGE TVAVNSIFEL HQLLARPGAI EKVLEVVNRL  360
KPEILTVVEQ EANHNGSVFL DRFTESLHYY STLFDSLESC GGGGGEEGVS VQDKVMSEVY  420
LGRQICNVVA CEGGDRVERH ETLGQWKSRL GSCGFEGVNL GSNAYKQASM LLALFAGGDG  480
YRVDENNGCL MLGWHTRPLI ATSAWKLTTT T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein