PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24556.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 195aa MW: 21280.2 Da PI: 8.4187

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H +H TEY24556.1 66 YQCKTCSKCFSSFQALGGHRASH 88 9***********99999998887 PP
2	zf-C2H2	11.4	0.001	118	140	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY24556.1 118 HECSICGAEFGSGQALGGHMRRH 140 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MMLQEVSTMI KGKRSKRPRS TSPLSVISDV SPSHSAHDEE AEEDMANCLI LLAKGRSSPP 60 PAEDAYQCKT CSKCFSSFQA LGGHRASHKK PLMDDTTNLS LQISSCRSAS SPSKTRVHEC 120 SICGAEFGSG QALGGHMRRH RPIPANHGVK KQRNLLSLDL NLPAPEDDQP ESKFPFATKE 180 QVIVFAASPL IHCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	8e-50	C2H2 family protein