PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY24575.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family HD-ZIP
Protein Properties Length: 225aa    MW: 25729.2 Da    PI: 8.6168
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY24575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.23.9e-2073125456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 + ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k
  TEY24575.1  73 KKRLSTEQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 125
                 55699***********************************************9 PP
2HD-ZIP_I/II121.54.3e-3972163293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kk+rls+eq+++LE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk+++da+++++++L++ev +Lr+ lke
   TEY24575.1  72 KKKRLSTEQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEFDAVSRDKHKLQQEVLALRAILKE 163
                  9**************************************************************************************88875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDWNGNLRVP FVSRPAADNS FSFLYNYNYD HFPGKPLLLS RMEMKQASAL LPAIMDKSSS  60
SNMNYGMGHD PKKKRLSTEQ LESLENSFQE EIKLDPDRKM KLAKELGLQP RQIAVWFQNR  120
RARWKGKQLE RLYDALKQEF DAVSRDKHKL QQEVLALRAI LKEQVAKKQA SAGCTEVSGE  180
ETVESTSSGK GRGEGNNQMG ECNYVLNVED YSPMIMTPYN WDALP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
172101KKKRLSTEQLESLENSFQEEIKLDPDRKMK
2120128RRARWKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.13e-49HD-ZIP family protein