PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY24653.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 331aa    MW: 37329.6 Da    PI: 10.7983
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY24653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.26.6e-11160201344
                 --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF   3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 
                 i + + r  tf kR+ g+lKK +EL +LC++e++  ++ ++g
  TEY24653.1 160 IADARTRRETFKKRKSGLLKKLNELKTLCNVEACGFVMNEDG 201
                 677888999*************************88888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MSALISNPPP LISHLCRPNP HSSFASPLIC RRLRFQIRAS SLELPLLPFP IDQVLIPSEV  60
KSLHLYEARY IALLEELDVK RASASVSLFQ KNKSFVHFVL DPIGLGGTST EASFAARYGR  120
KIRYRSIGFD KRCRSSKTVG VPKALNKFTM VRSKIKYQLI ADARTRRETF KKRKSGLLKK  180
LNELKTLCNV EACGFVMNED GSQSQVWPSM PAASQVVQRF LSLPSSSKTT NMVDQSGFLR  240
QNLSRISKNL DRETRKVQHL EKELRLVECL AKEQVDISNS KELYEMLRLL DRKIDLVDRK  300
IADVGPSSSV KAARARGIKP DLHLGKGKQP I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-22M-type_MADS family protein